nf-core/sarek

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

⭐ 553 | 🍴 526

ZackFreedman/Somatic

Open-hardware data glove

⭐ 417 | 🍴 56

Illumina/strelka

Strelka2 germline and somatic small variant caller

⭐ 391 | 🍴 107

google/deepsomatic

DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing data.

⭐ 294 | 🍴 45