PubMed - Moozonian Search

GitHub Repo https://github.com/naivenaive/EasyPubMed

EasyPubMed is an extension to make new PubMed easy to use

GitHub Repo https://github.com/pubmedqa/pubmedqa

PubMedQA: A Dataset for Biomedical Research Question Answering

GitHub Repo https://github.com/gijswobben/pymed

PyMed is a Python library that provides access to PubMed.

GitHub Repo https://github.com/billgreenwald/Pubmed-Batch-Download

Batch download articles based on PMID (Pubmed ID)

GitHub Repo https://github.com/rpsychologist/PubMed

DEPRECATED: PubMed datamining in R

GitHub Repo https://github.com/Darkroaster/pubmearch

A PubMed MCP server.

GitHub Repo https://github.com/titipata/pubmed_parser

:clipboard: A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset

GitHub Repo https://github.com/openags/paper-search-mcp

MCP, CLI, Skills for searching and downloading academic papers from multiple sources like arXiv, PubMed, bioRxiv, etc.

GitHub Repo https://github.com/ncbi-nlp/bluebert

BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).

GitHub Repo https://github.com/jannisborn/paperscraper

Tools to scrape publications & their metadata from pubmed, arxiv, medrxiv, biorxiv and chemrxiv.